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Fourth International Workshop on
Computational Systems Biology,

WCSB 2006
June 12-13, 2006
Tampere, Finland


Program of WCSB 2006 (updated 30.5.2006)

Monday 12.6

9:00-9:30 Registration
9:30-9:35 Opening, Professor Olli Yli-Harja
9:35-10:20
Susie Stephens, Oracle - Advances in Data Integration and Representation in Systems Biology [Abstract]
10:20-10:40
Sam Roberts, Mathworks - Modelling and Simulation of Biochemical Pathways [Abstract]
10:40-11:00 Coffee break
11:00-11:30 Christophe Roos, Medicel Ltd. - Biological data integration — get into the 'do' mode [Abstract]
11:30-12:30 Session 1
Aho, Tommi - Finding Infeasible Reactions in Metabolic Networks: Comparison of Methods
Eyheramendy, Susana - A Model-based Approach to Capture Genetic Variation for Future Association Studies
Opgen-Rhein, Rainer - Using Regularized Dynamic Correlation to Infer Gene Dependency Networks from Time-series Microarray Data
12:30-14:50 Lunch break + poster session 1
14:50-15:50 Stuart Kauffman
15:50-17:10 Session 2
Rämö, Pauli - Self-overlap in Boolean Networks
Andrecut, Mircea - Mean Field Model of Genetic Regulatory Networks [Abstract]
Villani, Marco - On the Distribution of Small Avalanches in Random Boolean Networks
Kesseli, Juha - Analyzing Boolean Network Dynamics using Attractor Basin Structure
17:10-17:30 Coffee break
17:30-18:00 Max Aldana - Robustness and Evolvability in Genetic Regulatory Networks [Abstract]
18:00-18:30 Music
18:30-19:00 Free time, discussions, posters, etc.
19:00-24:00 Conference banquet at restaurant Zip in TUT
     Talk: Robert Este - Enhancing "New Science" Outcomes of the Policy Process: Some Philosophical Problems [Abstract]

Tuesday 13.6

9:30-10:00 Maria Samsonova - Analysis and Management of Morphome Information [Abstract]
10:00-10:30 Coffee break
10:30-11:00 Matej Oresic - Characterization of Mammalian Systems using Molecular Profiling
11:00-11:50 Session 3
Niemistö, Antti - Automated Quantitative Analysis of Biomedical Microscopy Images [Abstract]
Selinummi, Jyrki - Automated Analysis of Golgi Apparatus Dispersion in Neuronal Cell Images
11:50-14:00 Lunch break + poster session 2
14:00-14:30 Korbinian Strimmer - Stein-Type Regularized Inference for Complex Biological Models [Abstract]
14:30-15:10 Session 4
Ortutay, Csaba - Immunome: Collection of Genes and Proteins for Systems Biological Studies on Human Immune System
Lowe, David - Gene Expression Predictors of Breast Outcome: A Visualisation Study
15:10-15:40 Coffee break
15:40-16:00 Jaakko Puhakka - Hydrogen energy generation through fermentation a case study of bioprocess development by combining experimental and modeling approaches [Abstract]
16:00-16:40 Olli-Pekka Kallioniemi - Canceromics
16:40-17:00 Closing --- Professor Olli Yli-Harja
18:00-23:00 Sauna at Hangaslahti. The bus starts in front of the university at 17:30.