Laboratory of Biosystem Dynamics (LBD)

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Our Team

PI: Andre S. Ribeiro
Professor
BioMediTech Institute, Office SM428
Tampere University of Technology
E-mail: andre.ribeiro_å_tut.fi
PI

The Laboratory of Biosystem Dynamics (LBD) is an highly interdisciplinary research group. At the moment, we have students with backgrounds in Molecular and Cell Biology, Biomedical Engineering, Biophysics, Signal and Image Processing, and Theoretical Biology. The goal is to make use of multiple perspectives and techniques from various areas of research to address questions in the areas of single cell biology, gene expression dynamics, genetic circuits, intracellular dynamics, etc.

Our Team Members
Group
From left to right:

(Top row)
Samuel Oliveira (samuel.oliveira_å_tut.fi), PhD student, Biotechnology and Computational Biology.
Andre Ribeiro, PhD (andre.ribeiro_å_tut.fi), aka "the PI", Computational Biology, Biophysics, Behavior Biology, Single Cell Biology.
Sofia Startceva (sofia.startceva_å_tut.fi), PhD student, Biophysics.
Bilena Almeida (bilena.almeida_å_tut.fi), PhD student, Biomedical Engineering.
Carolina Mendes (carolina.mendes_å_tut.fi), MSc student, Biochemistry.
Mahendra Prajapat, PhD (mahendra.prajapat_å_tut.fi), Post Doctoral Fellow, Computational Biology.

(Bottom row)
Vinodh Kandavalli (vinodh.kandavalli_å_tut.fi), PhD student, Molecular Biology.
Nadia Goncalves (nadia.moreiragoncalves_å_tut.fi), PhD student, Molecular Biology.
Mohamed Bahrudeen (mohamed.mohamedbahrudeen_å_student.tut.fi), PhD student, Biotechnology.
Vatsala Chauhan (vatsala.chauhan_å_tut.fi), PhD student, Molecular Biology.
Cristina Palma (cristina.palma_å_tut.fi), PhD student, Biomedical Engineering.

Alumni

PhD Theses

Xiaofeng Dai: Post-doctoral Fellow at University of Helsinki, Finland.
Olli-Pekka Smolander: Post-doctoral Fellow at University of Helsinki, Finland.
Ilya Potapov: Post-doctoral Fellow at the Luxembourg Institute of Health
Anantha-Barathi Muthukrishnan: Post-doctoral Fellow at IIT Madras, India.
Jason Lloyd-Price: Post-doctoral Fellow at Harvard University, U.S.A.
Jerome Chandraseelan: Post-doctoral Fellow at University of Tartu, Estonia.
Abhishekh Gupta: Post-doctoral Fellow at University of Connecticut, U.S.A.
Huy Tran: Post-doctoral Fellow at Ecole Normale Supérieure, Paris, France.
Antti Häkkinen: Post-doctoral Fellow at Helsinki University, Finland
Jarno Mäkelä: Post-doctoral Fellow at University of Oxford, UK
Eero Lihavainen: Data Engineer at Record Union, Gothenburg, Sweden.
Ramakanth Neeli-Venkata:
Post-doctoral Fellow at Institut Jacques Monod, Paris, France.

Masters Theses

J Lloyd-Price
J Mäkelä
E Lihavainen

LPV Martins

A Häkkinen

A Gupta

CCA Queimadelas

S Garasto

H Tran

SMD Oliveira

C Ferreira

A Martikainen

T Annila

M Zare
C Palma
M Bahrudeen

Post Doctoral Fellows

Shannon Healy.
Meenakshisundaram Kandhavelu.
Marco Minoia.