SGN Sim
 

by Andre S. Ribeiro and Jason Lloyd-Price
January 13, 2007.
 

Reference

Andre S. Ribeiro; Jason Lloyd-Price, (2007) SGN Sim, a Stochastic Genetic Networks Simulator, Bioinformatics, 23(6):777-779. doi:10.1093/bioinformatics/btm004.
 

Contact: andre.sanchesribeiro AT tut.fi

The simulator is available for Windows XP here:

SGNS.zip (401kb)

1) Exs.pdf  - pdf with all described examples and results.
2) man_sgns.pdf - manual for the dynamics simulator
3) man_sgne.pdf - manual for the networks ensemble generator

4) Examples_Reactions.zip - Files of reactions and ensemble parameters for all examples
 

Link to Andre S. Ribeiro Webpage: http://www.cs.tut.fi/~sanchesr/